General
Preferred name
THZ531
Synonyms
THZ-531 ()
P&D ID
PD078419
CAS
1702809-17-3
Tags
available
molecular glue
covalent binder
drug candidate
probe
Drug indication
Solid tumour/cancer
Probe info
Probe type
experimental probe
Probe sources
Chemical Probes for Understudied Kinases
Chemical Probes.org
Gray Laboratory Probes
High-quality chemical probes
Probe targets
[[ compound.targets[t].gene_name ]]
Probe control
Probe control not defined
Orthogonal probes
3
No orthogonal probes found
Similar probes
1
No structurally similar probes found
Structure formats
[[ format ]]
[[ compound[format === 'MOL' ? 'molblock' : format.toLowerCase()] ]]
Description
(extracted from source data)
COMMENT
THZ531 is a high quality irreversible cysteine-reactive covalent acrylamide inhibitor of CDK12 and CD13 with high selectivity over other human protein kinases. Several lines of evidence, including mass spectrometry and a co-crystal structure demonstrate covalent bond formation with the target cysteine and the target binding mode as well as requirement for the target cysteine for inhibitor activity. Kinase profiling data indicate high selectivity for the intended target and an inactive analog provides a selectivity control. Nov 10 2020 - 12:34pm; The probe is well characterised, and shows selective activity at CDK12/13 in Jurkat cells, as seen in Kinativ profiling. In particular, good selectivity over other CDK family is observed. However, the compound does not show good selectivity in Ambit kinase binding profiling showing comparable binding at JNK family, GSK3, and ~10 other targets within 10 fold of the CDK13 activity. 10 fold selectivity over CDK7 is observed Kinativ profiling suggests that in the context of Jurkat cells, this binding affinity translates to reasonable selectivity for CDK12/13 (these two are equiactive), but care is required in interpreting findings with this molecule, particularly in different cell lines where different expression and activity levels of different kinases may be observed. At the time of writing this represents the best available tool for CDK12/13, but combining this with additional tools is recommended, as is the use of C to S mutants of CDK12 (as carried out by Zhang et al) to tease out the contribution of CDK12. Feb 26 2021 - 4:00pm
PRICE
169
MOA
Covalent Inhibitor
(Chemical Probes.org)
DESCRIPTION
THZ531 is an inhibitor of CDK12 and CDK13 with IC50 values of 158 and 69 nM, respectively. THZ531 inhibits proliferation of Jurkat cells with IC50 value of 50 nM and induces apoptosis in a concentration-dependent manner. THZ531 causes a loss of gene expression with concurrent loss of elongating and hyperphosphorylated RNA polymerase II.
(BOC Sciences Bioactive Compounds)
DESCRIPTION
THZ531 is a selective and covalent inhibitor of both CDK12 and CDK13.
(Enamine Bioactive Compounds)
DESCRIPTION
THZ531 is a covalent inhibitor of both CDK12(IC50=158 nM) and CDK13(IC50=69 nM).
(TargetMol Bioactive Compound Library)
[[ p.pathway_name ]]
[[ compound.targets[tid].gene_name ]]
Cell lines
9
Organisms
0
Compound Sets
20
AdooQ Bioactive Compound Library
Axon Medchem Screening Library
BOC Sciences Bioactive Compounds
Cayman Chemical Bioactives
Chemical Probes for Understudied Kinases
Chemical Probes.org
Chemical proteomics reveals the target landscape of 1,000 kinase inhibitors
CovalentInDB
CZ-OPENSCREEN Bioactive Library
DrugMAP
Enamine Bioactive Compounds
EU-OPENSCREEN Bioactive Compound Library
Gray Laboratory Probes
High-quality chemical probes
Kinase Chemogenomic Set (KCGS)
MedChem Express Bioactive Compound Library
MolGlueDB
Selleckchem Bioactive Compound Library
TargetMol Bioactive Compound Library
[[ a.name ]]
[[ ligand_id ]]
free of charge
External IDs
17
Molecular Weight
557.23
Hydrogen Bond Acceptors
6
Hydrogen Bond Donors
3
Rotatable Bonds
8
Ring Count
5
Aromatic Ring Count
4
cLogP
5.05
TPSA
106.25
Fraction CSP3
0.27
Chiral centers
1.0
Largest ring
6.0
QED
0.26
Structural alerts
0
No structural alerts detected
Custom attributes
(extracted from source data)
Target
CDK
CDK12
CDK13
CDK12, CDK13
CDK12,CDK13
CDK12/13 inhibitor
Control
THZ531R
THZ531R, THZ532
Target subclass
CMGC
CMGC, CMGC
Target class
Protein kinase
Kinase, Kinase
Pathway
Cell Cycle/Checkpoint
Cell Cycle/DNA Damage
Source data