Compounds
Name
Compound type
Version
Size
File
Compounds (csv)
original
02.2024
55.06 MB
Compounds (csv)
standardized
02.2024
47.64 MB
Compounds (csv)
nonisomeric
02.2024
38.63 MB
Compounds (sdf)
original
02.2024
396.54 MB
Compounds (sdf)
standardized
02.2024
338.69 MB
Compounds (sdf)
nonisomeric
02.2024
293.57 MB
Targets & activities
Name
Compound type
Version
Size
File
Targets and activities (csv)
original
02.2024
81.13 MB
Targets and activities (csv)
standardized
02.2024
80.87 MB
Targets and activities (csv)
nonisomeric
02.2024
79.58 MB
Targets and activities (xlsx)
original
02.2024
47.17 MB
Targets and activities (xlsx)
standardized
02.2024
43.4 MB
Targets and activities (xlsx)
nonisomeric
02.2024
38.58 MB
Chemical probes
Name
Compound type
Version
Size
File
Chemical probes (xlsx)
standardized
02.2024
2.0 MB
Compound ID mapping
Name
Compound type
Version
Size
File
Compound ID mapping (csv)
original
02.2024
33.78 MB
Compound ID mapping (csv)
standardized
02.2024
29.96 MB
Compound ID mapping (csv)
nonisomeric
02.2024
23.22 MB
Database dump
Name
Version
Size
File
PostgreSQL database dump (zip)
02.2024
180.99 MB
SQLite database (zip)
02.2024
286.87 MB
# To restore the data from the PostgreSQL dump, first, you need to extract (unzip) the dump and create an empty database:
CREATE DATABASE database_name WITH OWNER username;
# Then you can restore the dump using:
pg_restore --no-owner -h HOST -p PORT -U USERNAME -d database_name /path/to/pd_dump.sql
Please be aware that internal database IDs are not preserved and may change from version to version. The only IDs that are consistently preserved are compounds' PDIDs, which can be used to link to P&D.